SAS Output
The SAS System

Obs PUBCSNUM REG MAR_STAT RACE1V NHIADE SEX YR_BRTH SEQ_NUM MDXRECMP YEAR_DX PRIMSITE LATERAL HISTO2V BEHO2V HISTO3V BEHO3V GRADE DX_CONF REPT_SRC EOD10_SZ EOD10_EX EOD10_PE EOD10_ND EOD10_PN EOD10_NE EOD13 EOD2 EOD4 EOD_CODE TUMOR_1V TUMOR_2V TUMOR_3V CSTUMSIZ CSEXTEN CSLYMPHN CSMETSDX CS1SITE CS2SITE CS3SITE CS4SITE CS5SITE CS6SITE CS25SITE DAJCCT DAJCCN DAJCCM DSS1977S DSS2000S DAJCCFL CSVFIRST CSVLATES CSVCURRENT SURGPRIF SURGSCOF SURGSITF NUMNODES NO_SURG SS_SURG SURGSCOP SURGSITE REC_NO TYPE_FU AGE_1REC SITERWHO ICDOTO9V ICDOT10V ICCC3WHO ICCC3XWHO BEHTREND HISTREC HISTRECB CS0204SCHEMA RAC_RECA RAC_RECY ORIGRECB HST_STGA AJCC_STG AJ_3SEER SSS77VZ SSSM2KPZ FIRSTPRM ST_CNTY CODPUB CODPUBKM STAT_REC IHSLINK SUMM2K AYASITERWHO LYMSUBRWHO CSTSEVAL CSRGEVAL CSMTEVAL INTPRIM ERSTATUS PRSTATUS CSSCHEMA CS8SITE CS10SITE CS11SITE CS13SITE CS15SITE CS16SITE VASINV SRV_TIME_MON_FLAG INSREC_PUB DAJCC7T DAJCC7N DAJCC7M DAJCC7STG ADJTM_6VALUE ADJNM_6VALUE ADJM_6VALUE ADJAJCCSTG CS7SITE CS9SITE CS12SITE HER2 BRST_SUB ANNARBOR CSMETSDXB_PUB CSMETSDXBR_PUB CSMETSDXLIV_PUB CSMETSDXLUNG_PUB T_VALUE N_VALUE M_VALUE MALIGCOUNT BENBORDCOUNT RADIATNR RAD_BRNR RAD_SURG CHEMO_RX_REC SRV_TIME_MON VSRTSADX ODTHCLASS AGE_DX DAJCCSTG status age_cat grade_class stage_3 stage_6 sex_m hist
1 05100014 0000001502 2 01   1 1914 02 04 1995 C341 1 8012 3 8012 3 3 2 1 040 99   9 98 00       4 9 9 9                                                 6 00     01 2 17 22030 1623 C341 116 100 3 01 98 063 1 1 0 9 90 90 9   0 09009 50060 50060 0 0   35 99       1 9 9 47               1                         9 9 8         99 99 99 02 00         8 9 9 81 . 9 7 3 . . 1 2
2 05100024 0000001502 2 01   1 1902 02 09 1978 C343 1 8070 3 8070 3 9 2 1             20-41000--000     2     9                                                 9 09     01 2 16 22030 1625 C343 116 100 3 02 98 063 1 1 0           0 09009 22030 22030 0     35         1 9 9 47               1                         9 9 8               02 00         23 9 9 76 . 9 6 9 . . 1 2
3 05100027 0000001502 2 01   2 1910 02 02 1975 C341 1 8140 3 8140 3 3 1 1               -0   1     9                                                 9 09     01 2 13 22030 1623 C341 116 100 3 05 98 063 1 1 0           0 09001 22030 22030 0     35         1 9 9 47               1                         9 9 8               02 00         4 9 9 64 . 9 5 3 . . 2 2
4 05100031 0000001502 4 01   2 1924 02 01 1991 C343 1 8010 3 8010 3 3 2 1 030 85   9 98 00       4 9 9 9                                                 1 00     01 2 14 22030 1625 C343 116 100 3 01 98 063 1 1 0 4 40 40     0 09009 22030 22030 0 0   35 99       1 9 9 47               1                         9 9 8         99 99 10 02 00         3 9 9 66 . 9 5 3 4 . 2 2
5 05100065 0000001502 2 01   2 1923 02 03 2006 C341 1 8041 3 8041 3 3 1 1         97 96               999 210 600 00 999           988 20 30 00 7 7   010200 020550 020520 00 0 0   1       01 2 17 22030 1623 C341 116 100 3 01 98 063 1 1 0 4         0 09009 22030 22030 0 0 7 35 99 1 0 0 1 9 9 47               1                         9 9 8               02 00         0 9 9 82 53 9 7 3 . 3 2 1
6 05100073 0000001502 2 01   2 1909 02 01 1978 C349 1 8020 3 8020 3 4 1 1             ---410073-011     2     9                                                 9 09     01 2 14 22030 1629 C349 116 100 3 01 98 063 1 1 0           0 09003 22030 22030 0     35         1 9 9 47               1                         9 9 8               02 00         0 9 9 68 . 9 5 3 . . 2 2
7 05100076 0000001502 5 01   2 1900 02 06 1984 C341 2 8010 3 8010 3 9 1 1                 3030 3     9                                                 9 09     01 2 17 22030 1623 C341 116 100 3 01 98 063 1 1 0           0 09003 38000 38000 0     35 99       1 9 9 47               1                         9 9 8               02 00         9 9 9 84 . 9 7 9 . . 2 2
8 05100081 0000001502 5 01   1 1925 02 08 2008 C341 1 8010 3 8046 3 3 1 1         98 00               999 600 200 00 988           988 30 20 00 7 4   010401 020550 020510 00 0 0   1       01 2 17 22030 1623 C341 116 100 3 01 98 063 1 1 0 2         0 09003 50300 50300 0 0 2 35 99 0 0 0 1 9 9 47               1 3                       9 9 8               02 00         0 9 9 83 52 9 7 3 . 3 1 2
9 05100090 0000001502 2 01   2 1932 03 06 1979 C349 9 8070 3 8070 3 9 7 1             ---&&000--000     2     9                                                 9 09     01 2 10 22030 1629 C349 116 100 3 02 98 063 1 1 0           0 09007 32020 32020 0     35         1 9 9 47               3                         9 9 8               03 00         9 9 9 46 . 9 3 9 . . 2 2
10 05100105 0000001502 4 01   2 1932 02 05 1990 C341 1 8012 3 8012 3 4 1 1 012 40   0 00 02       4 9 9 9                                                 0 30     01 2 12 22030 1623 C341 116 100 3 01 98 063 1 1 0 2 10 10     0 09011 22030 22030 0 0   35 99       1 9 9 47               1                         9 9 8         20 00 00 02 00         81 9 9 58 . 9 4 3 1 . 2 2



The SAS System

The PHREG Procedure

Model Information
Data Set WORK.LUNG_DATA_5YEAR
Dependent Variable SRV_TIME_MON
Censoring Variable VSRTSADX
Censoring Value(s) 0
Ties Handling BRESLOW

Number of Observations Read
Number of Observations Used
257401
232509

Class Level Information
Class Value Design Variables
sex_m 1 0          
  2 1          
grade_class 1 0 0 0      
  2 1 0 0      
  3 0 1 0      
  9 0 0 1      
age_cat 1 0 0 0 0 0 0
  2 1 0 0 0 0 0
  3 0 1 0 0 0 0
  4 0 0 1 0 0 0
  5 0 0 0 1 0 0
  6 0 0 0 0 1 0
  7 0 0 0 0 0 1
stage_6 1 0 0 0      
  2 1 0 0      
  3 0 1 0      
  4 0 0 1      
hist 1 0          
  2 1          

Summary of the Number of Event and Censored
Values
Total Event Censored Percent
Censored
232509 179591 52918 22.76

Convergence Status
Convergence criterion (GCONV=1E-8) satisfied.

Model Fit Statistics
Criterion Without
Covariates
With
Covariates
-2 LOG L 4199069.0 4112547.7
AIC 4199069.0 4112575.7
SBC 4199069.0 4112717.1

Testing Global Null Hypothesis: BETA=0
Test Chi-Square DF Pr > ChiSq
Likelihood Ratio 86521.3443 14 <.0001
Score 82125.7443 14 <.0001
Wald 71669.5945 14 <.0001

Type 3 Tests
Effect DF Wald Chi-Square Pr > ChiSq
age_cat 6 5219.0060 <.0001
sex_m 1 1287.2533 <.0001
grade_class 3 3831.4148 <.0001
stage_6 3 50559.5698 <.0001
hist 1 129.0857 <.0001

Analysis of Maximum Likelihood Estimates
Parameter   DF Parameter
Estimate
Standard
Error
Chi-Square Pr > ChiSq Hazard
Ratio
Label
age_cat 2 1 0.18344 0.09548 3.6911 0.0547 1.201 age_cat 2
age_cat 3 1 0.32896 0.09074 13.1422 0.0003 1.390 age_cat 3
age_cat 4 1 0.39827 0.09034 19.4340 <.0001 1.489 age_cat 4
age_cat 5 1 0.48549 0.09027 28.9225 <.0001 1.625 age_cat 5
age_cat 6 1 0.66169 0.09028 53.7223 <.0001 1.938 age_cat 6
age_cat 7 1 0.89552 0.09039 98.1622 <.0001 2.449 age_cat 7
sex_m 2 1 -0.17086 0.00476 1287.2533 <.0001 0.843 sex_m 2
grade_class 2 1 0.32849 0.01582 431.2938 <.0001 1.389 grade_class 2
grade_class 3 1 0.61528 0.01510 1660.0738 <.0001 1.850 grade_class 3
grade_class 9 1 0.69692 0.01497 2165.8898 <.0001 2.008 grade_class 9
stage_6 2 1 0.55276 0.01361 1649.5504 <.0001 1.738 stage_6 2
stage_6 3 1 1.08606 0.00858 16026.4269 <.0001 2.963 stage_6 3
stage_6 4 1 1.74009 0.00828 44147.9498 <.0001 5.698 stage_6 4
hist 2 1 -0.07649 0.00673 129.0857 <.0001 0.926 hist 2



The SAS System

The PHREG Procedure

Model Information
Data Set WORK.LUNG_DATA_2YEAR
Dependent Variable SRV_TIME_MON
Censoring Variable VSRTSADX
Censoring Value(s) 0
Ties Handling BRESLOW

Number of Observations Read
Number of Observations Used
355140
323274

Class Level Information
Class Value Design Variables
sex_m 1 0          
  2 1          
grade_class 1 0 0 0      
  2 1 0 0      
  3 0 1 0      
  9 0 0 1      
age_cat 1 0 0 0 0 0 0
  2 1 0 0 0 0 0
  3 0 1 0 0 0 0
  4 0 0 1 0 0 0
  5 0 0 0 1 0 0
  6 0 0 0 0 1 0
  7 0 0 0 0 0 1
stage_6 1 0 0 0      
  2 1 0 0      
  3 0 1 0      
  4 0 0 1      
hist 1 0          
  2 1          

Summary of the Number of Event and Censored
Values
Total Event Censored Percent
Censored
323274 240312 82962 25.66

Convergence Status
Convergence criterion (GCONV=1E-8) satisfied.

Model Fit Statistics
Criterion Without
Covariates
With
Covariates
-2 LOG L 5784351.4 5665157.4
AIC 5784351.4 5665185.4
SBC 5784351.4 5665330.9

Testing Global Null Hypothesis: BETA=0
Test Chi-Square DF Pr > ChiSq
Likelihood Ratio 119193.933 14 <.0001
Score 112109.307 14 <.0001
Wald 96934.4820 14 <.0001

Type 3 Tests
Effect DF Wald Chi-Square Pr > ChiSq
age_cat 6 7162.1598 <.0001
sex_m 1 1900.5897 <.0001
grade_class 3 5425.1727 <.0001
stage_6 3 68045.3778 <.0001
hist 1 278.8830 <.0001

Analysis of Maximum Likelihood Estimates
Parameter   DF Parameter
Estimate
Standard
Error
Chi-Square Pr > ChiSq Hazard
Ratio
Label
age_cat 2 1 0.13110 0.08122 2.6053 0.1065 1.140 age_cat 2
age_cat 3 1 0.31237 0.07680 16.5421 <.0001 1.367 age_cat 3
age_cat 4 1 0.38570 0.07641 25.4811 <.0001 1.471 age_cat 4
age_cat 5 1 0.46937 0.07635 37.7963 <.0001 1.599 age_cat 5
age_cat 6 1 0.64280 0.07635 70.8825 <.0001 1.902 age_cat 6
age_cat 7 1 0.88890 0.07644 135.2213 <.0001 2.432 age_cat 7
sex_m 2 1 -0.17943 0.00412 1900.5897 <.0001 0.836 sex_m 2
grade_class 2 1 0.34691 0.01387 625.4729 <.0001 1.415 grade_class 2
grade_class 3 1 0.65234 0.01326 2421.6514 <.0001 1.920 grade_class 3
grade_class 9 1 0.72420 0.01313 3042.8446 <.0001 2.063 grade_class 9
stage_6 2 1 0.57378 0.01208 2256.1148 <.0001 1.775 stage_6 2
stage_6 3 1 1.11134 0.00757 21540.3193 <.0001 3.038 stage_6 3
stage_6 4 1 1.76449 0.00727 58960.9461 <.0001 5.839 stage_6 4
hist 2 1 -0.09667 0.00579 278.8830 <.0001 0.908 hist 2



The SAS System

The PHREG Procedure

Model Information
Data Set WORK.LUNG_DATA_1YEAR
Dependent Variable SRV_TIME_MON
Censoring Variable VSRTSADX
Censoring Value(s) 0
Ties Handling BRESLOW

Number of Observations Read
Number of Observations Used
388220
354224

Class Level Information
Class Value Design Variables
sex_m 1 0          
  2 1          
grade_class 1 0 0 0      
  2 1 0 0      
  3 0 1 0      
  9 0 0 1      
age_cat 1 0 0 0 0 0 0
  2 1 0 0 0 0 0
  3 0 1 0 0 0 0
  4 0 0 1 0 0 0
  5 0 0 0 1 0 0
  6 0 0 0 0 1 0
  7 0 0 0 0 0 1
stage_6 1 0 0 0      
  2 1 0 0      
  3 0 1 0      
  4 0 0 1      
hist 1 0          
  2 1          

Summary of the Number of Event and Censored
Values
Total Event Censored Percent
Censored
354224 255968 98256 27.74

Convergence Status
Convergence criterion (GCONV=1E-8) satisfied.

Model Fit Statistics
Criterion Without
Covariates
With
Covariates
-2 LOG L 6206687.3 6078355.4
AIC 6206687.3 6078383.4
SBC 6206687.3 6078529.7

Testing Global Null Hypothesis: BETA=0
Test Chi-Square DF Pr > ChiSq
Likelihood Ratio 128331.987 14 <.0001
Score 120356.801 14 <.0001
Wald 103751.666 14 <.0001

Type 3 Tests
Effect DF Wald Chi-Square Pr > ChiSq
age_cat 6 7875.2415 <.0001
sex_m 1 2072.5277 <.0001
grade_class 3 5813.8115 <.0001
stage_6 3 72815.3256 <.0001
hist 1 329.5334 <.0001

Analysis of Maximum Likelihood Estimates
Parameter   DF Parameter
Estimate
Standard
Error
Chi-Square Pr > ChiSq Hazard
Ratio
Label
age_cat 2 1 0.14162 0.08038 3.1044 0.0781 1.152 age_cat 2
age_cat 3 1 0.32534 0.07613 18.2625 <.0001 1.385 age_cat 3
age_cat 4 1 0.40096 0.07574 28.0228 <.0001 1.493 age_cat 4
age_cat 5 1 0.48396 0.07568 40.8886 <.0001 1.622 age_cat 5
age_cat 6 1 0.65847 0.07569 75.6895 <.0001 1.932 age_cat 6
age_cat 7 1 0.91182 0.07577 144.8093 <.0001 2.489 age_cat 7
sex_m 2 1 -0.18155 0.00399 2072.5277 <.0001 0.834 sex_m 2
grade_class 2 1 0.34469 0.01355 647.1966 <.0001 1.412 grade_class 2
grade_class 3 1 0.65799 0.01295 2582.3387 <.0001 1.931 grade_class 3
grade_class 9 1 0.72573 0.01282 3205.4308 <.0001 2.066 grade_class 9
stage_6 2 1 0.57888 0.01184 2391.8508 <.0001 1.784 stage_6 2
stage_6 3 1 1.12102 0.00739 22984.3050 <.0001 3.068 stage_6 3
stage_6 4 1 1.77614 0.00708 62872.0635 <.0001 5.907 stage_6 4
hist 2 1 -0.10151 0.00559 329.5334 <.0001 0.903 hist 2